Sample Tag Metrics
File: [sample_name]_Sample_Tag_Metrics.csv
The Sample Tag metrics file contains statistics on the reads aligned to each Sample Tag and cells called for each sample. For example:
| File | Description | Major contributing factors |
|---|---|---|
| Sample_Tag | List of the Sample Tags in the pipeline run | — |
| Sample_Name | User-provided sample name | — |
| Raw_Reads | Number of reads aligned to each Sample Tag | Sample Tag sequencing amount |
| Pct_of_Raw_Reads | Percentage of Sample Tag reads aligned to each Sample Tag | Sample Tag sequencing amount |
| Cells_Called | Number of putative cells called for each Sample Tag | Number of cells input and captured by cartridge workflowSample Tag sequencing amount |
| Pct_of_Putative_Cells_Called | Percentage of putative cells called for each Sample Tag | Number of cells input and captured by cartridge workflowSample Tag sequencing amount |
| Raw_Reads_in_Called_Cells | Number of Sample Tag reads that are assigned to called cells | Sample Tag sequencing amount |
| Mean_Reads_per_Called_Cell | Average number of Sample Tag reads representing each called cell | Sample Tag sequencing amount |