Sample Tag Metrics

File: [sample_name]_Sample_Tag_Metrics.csv

The Sample Tag metrics file contains statistics on the reads aligned to each Sample Tag and cells called for each sample. For example:

File	Description	Major contributing factors
Sample_Tag	List of the Sample Tags in the pipeline run	—
Sample_Name	User-provided sample name	—
Raw_Reads	Number of reads aligned to each Sample Tag	Sample Tag sequencing amount
Pct_of_Raw_Reads	Percentage of Sample Tag reads aligned to each Sample Tag	Sample Tag sequencing amount
Cells_Called	Number of putative cells called for each Sample Tag	Number of cells input and captured by cartridge workflow Sample Tag sequencing amount
Pct_of_Putative_Cells_Called	Percentage of putative cells called for each Sample Tag	Number of cells input and captured by cartridge workflow Sample Tag sequencing amount
Raw_Reads_in_Called_Cells	Number of Sample Tag reads that are assigned to called cells	Sample Tag sequencing amount
Mean_Reads_per_Called_Cell	Average number of Sample Tag reads representing each called cell	Sample Tag sequencing amount